STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106585818COMM domain-containing protein 1-like. (189 aa)    
Predicted Functional Partners:
commd2
COMM domain-containing protein 2.
    
 0.983
comd5
COMM domain-containing protein 5.
    
 0.976
comd4
COMM domain-containing protein 4 isoform X1.
    
 0.975
commd9
COMM domain-containing protein 9.
    
 0.971
ccd22
Coiled-coil domain-containing protein 22.
    
 0.967
LOC106572219
Coiled-coil domain-containing protein 22-like.
    
 0.967
COMD3
COMM domain-containing protein 3.
    
 0.964
CUL2
Cullin-2 isoform X1; Belongs to the cullin family.
    
 0.945
vps35l
UPF0505 protein C16orf62 homolog isoform X2.
    
 
 0.931
cul2
Cullin 2.
    
 0.924
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.