Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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LOC106599711Desmoglein-2-like; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. (1182 aa)    
Predicted Functional Partners:
pkp2
Plakophilin-2.
   
 0.971
LOC106576400
Plakophilin-2-like.
   
 0.971
ENSSSAP00000006163
annotation not available
   
 0.966
LOC106600820
Junction plakoglobin-like isoform X1.
   
 0.966
LOC106564751
Junction plakoglobin-like.
   
 0.966
plak
Junction plakoglobin isoform X1.
   
 0.966
LOC106566027
Plakophilin-1-like isoform X1.
   
 0.958
LOC106582715
Plakophilin-1-like.
   
 0.958
LOC106566189
Keratin, type II cytoskeletal 8-like isoform X1; Belongs to the intermediate filament family.
     
  0.915
LOC106566665
Intermediate filament protein ON3-like; Belongs to the intermediate filament family.
     
  0.915
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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