STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106600622Sterile alpha motif domain-containing protein 10-like isoform X1. (229 aa)    
Predicted Functional Partners:
LOC106610979
Leucine-rich repeat-containing protein 9-like isoform X1.
      
 0.601
yeats2
YEATS domain-containing protein 2.
   
  
 0.601
star7
StAR-related lipid transfer protein 7.
      
 0.600
LOC106563200
stAR-related lipid transfer protein 7, mitochondrial-like.
      
 0.600
LOC106561052
Harmonin-like isoform X2.
      
 0.584
LOC106584586
Harmonin-like.
      
 0.584
LOC106611555
Rap guanine nucleotide exchange factor 2-like isoform X5.
      
 0.583
rapgef2
Rap guanine nucleotide exchange factor 2 isoform X8.
      
 0.583
ENSSSAP00000071238
Rap guanine nucleotide exchange factor (GEF) 6.
      
 0.583
acot7
Cytosolic acyl coenzyme A thioester hydrolase.
      
 0.489
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.