STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106602921A disintegrin and metalloproteinase with thrombospondin motifs 2-like. (1345 aa)    
Predicted Functional Partners:
LOC106561991
A disintegrin and metalloproteinase with thrombospondin motifs 18-like isoform X1.
   
 
 0.604
LOC106587290
A disintegrin and metalloproteinase with thrombospondin motifs 18-like.
   
 
 0.604
parp2
Poly [ADP-ribose] polymerase.
   
  
 0.590
LOC106587801
ADAMTS-like protein 3.
     
 0.574
ccbe1
Collagen and calcium-binding EGF domain-containing protein 1 isoform X1.
      
 0.574
LOC106591065
ADAMTS-like protein 3.
     
 0.574
adamts13
A disintegrin and metalloproteinase with thrombospondin motifs 13.
     
 0.561
LOC106569003
Transforming growth factor beta-1-like.
      
 0.543
LOC106599003
Growth/differentiation factor 15-like.
      
 0.543
pald1
Paladin.
   
  
 0.541
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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