STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000001779Speckle-type POZ protein-like A. (249 aa)    
Predicted Functional Partners:
LOC106612448
Cullin-3-like.
   
 0.946
LOC106600593
Cullin-3-like; Belongs to the cullin family.
   
 0.946
LOC106580681
Cullin-3; Belongs to the cullin family.
   
 0.946
CUL3
Cullin-3-like; Belongs to the cullin family.
   
 0.935
LOC106566129
Zinc finger protein GLI1-like.
   
 0.921
gli1
Zinc finger protein GLI1.
   
 0.921
gli3
Transcriptional activator GLI3 isoform X1.
   
 0.910
ENSSSAP00000095822
Transcriptional activator GLI3-like.
   
 0.910
LOC106578726
Transcriptional activator GLI3-like isoform X2.
   
 0.910
LOC106574262
Zinc finger protein GLI2-like isoform X1.
   
 0.894
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.