Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mfs11UNC93-like protein MFSD11. (453 aa)    
Predicted Functional Partners:
svopl
Putative transporter SVOPL.
      
 0.652
LOC106603928
Protein spinster homolog 3-like.
      
 0.650
mfsd9
Major facilitator superfamily domain-containing protein 9.
      
 0.650
LOC106572652
Molybdate-anion transporter-like.
      
 0.648
mfsd5
Major facilitator superfamily domain-containing protein 5 precursor.
      
 0.648
LOC106579271
Transmembrane protein 180-like.
      
 0.581
LOC106578307
Transmembrane protein 180-like.
      
 0.581
LOC106569838
Major facilitator superfamily domain-containing protein 12-like.
      
 0.573
mettl23
LOW QUALITY PROTEIN: methyltransferase-like protein 23.
      
 0.569
ENSSSAP00000012100
Major facilitator superfamily domain containing 6-like.
      
 0.566
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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