Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
marveld1MARVEL domain-containing protein 1. (162 aa)    
Predicted Functional Partners:
slf1
Ankyrin repeat domain-containing protein 32 isoform X1.
      
 0.662
actr8
Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize (By similarity); Belongs to the actin family. ARP8 subfamily.
      
 0.639
telo2
Telomere length regulation protein TEL2 homolog isoform X1.
      
 0.635
LOC106600999
Reprimo-like protein.
      
 0.592
LOC106586444
Von Willebrand factor C domain-containing protein 2-like.
      
 0.563
hus1
Checkpoint protein; Belongs to the HUS1 family.
      
 0.542
cssa24h9orf64
Queuosine salvage protein; Involved in salvaging queuosine.
      
 0.486
cklf7
CKLF-like MARVEL transmembrane domain-containing protein 7.
      
 0.485
pgap3
Post-GPI attachment to proteins factor 3; Involved in the lipid remodeling steps of GPI-anchor maturation; Belongs to the PGAP3 family.
      
 0.477
RABAC1
PRA1 family protein.
      
 0.454
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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