STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
avpi1Arginine vasopressin-induced protein 1 isoform X2. (220 aa)    
Predicted Functional Partners:
mrps10
28S ribosomal protein S10, mitochondrial.
      
 0.508
LOC106583462
NCK-interacting protein with SH3 domain-like isoform X1.
      
 0.507
nckipsd
NCK-interacting protein with SH3 domain isoform X1.
      
 0.507
ENSSSAP00000036322
annotation not available
      
 0.457
alkb7
Alkylated DNA repair protein alkB homolog 7.
      
 0.457
ENSSSAP00000067434
annotation not available
      
 0.457
pigp
Phosphatidylinositol N-acetylglucosaminyltransferase subunit P; Part of the complex catalyzing the transfer of N- acetylglucosamine from UDP-N-acetylglucosamine to phosphatidylinositol, the first step of GPI biosynthesis.
      
 0.433
ENSSSAP00000087257
annotation not available
      
 0.433
idua
alpha-L-iduronidase isoform X1.
      
 0.424
NEUS
Neuroserpin precursor; Belongs to the serpin family.
      
 0.408
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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