STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
avpi1Arginine vasopressin-induced protein 1 isoform X2. (220 aa)    
Predicted Functional Partners:
UNC119
Protein unc-119 homolog A-like.
    
   0.729
UNC119-2
Protein unc-119 homolog A-like.
    
   0.729
mfap3
Microfibril-associated glycoprotein 3.
      
 0.681
LOC106583462
NCK-interacting protein with SH3 domain-like isoform X1.
      
 0.571
nckipsd
NCK-interacting protein with SH3 domain isoform X1.
      
 0.571
mrps10
28S ribosomal protein S10, mitochondrial.
      
 0.564
pigp
Phosphatidylinositol N-acetylglucosaminyltransferase subunit P; Part of the complex catalyzing the transfer of N- acetylglucosamine from UDP-N-acetylglucosamine to phosphatidylinositol, the first step of GPI biosynthesis.
      
 0.562
ENSSSAP00000087257
annotation not available
      
 0.562
ENSSSAP00000036322
annotation not available
      
 0.555
alkb7
Alkylated DNA repair protein alkB homolog 7.
      
 0.555
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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