STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106604325Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (399 aa)    
Predicted Functional Partners:
LOC106611327
Vacuolar protein 8-like isoform X1.
    
 
 0.811
wrn
Werner syndrome ATP-dependent helicase isoform X2.
    
 
 0.676
LOC106577585
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.627
LOC106608625
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.627
abcb7
ATP-binding cassette sub-family B member 7, mitochondrial.
      
 0.572
GDF10
Growth/differentiation factor 10-like.
      
 0.570
zdhhc24
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.553
lzic
Protein LZIC isoform X2.
      
 0.540
timeless
Protein timeless homolog.
   
 
 0.539
tipin
TIMELESS-interacting protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family.
   
 
 0.534
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.