Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106609157Choline O-acetyltransferase-like; Belongs to the carnitine/choline acetyltransferase family. (645 aa)    
Predicted Functional Partners:
LOC106609148
Probable vesicular acetylcholine transporter-B.
   
 
 0.943
SLC18A3
Probable vesicular acetylcholine transporter-A.
   
 
 0.943
ENSSSAP00000111870
Solute carrier family 18 member 3b.
   
 
 0.943
LOC106573758
Choline kinase alpha-like.
   
 
 0.926
chkb
Choline/ethanolamine kinase.
   
 
 0.925
PHOSPHO1
Probable phosphatase phospho1 isoform X1.
     
 0.923
LOC106609689
Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.
     
 0.912
ENSSSAP00000020686
annotation not available
     
 0.912
LOC106577883
Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.
     
 0.912
LOC106608940
Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.
     
 0.912
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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