STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ubald2UBA-like domain-containing protein 2. (178 aa)    
Predicted Functional Partners:
edem2
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
      
 0.601
ccdc150
Coiled-coil domain-containing protein 150 isoform X2.
      
 0.597
LOC106601120
Transcription factor MafK-like.
      
 0.585
LOC106607337
Transcription factor MafK-like.
      
 0.585
ccdc34
Coiled-coil domain-containing protein 34 isoform X1.
      
 0.568
LOC106567184
Nuclear envelope integral membrane protein 1-like isoform X1.
      
 0.511
LOC106572491
Nuclear envelope integral membrane protein 1-like isoform X1.
      
 0.511
ENSSSAP00000069493
annotation not available
      
 0.510
ccdc77
Coiled-coil domain-containing protein 77.
      
 0.510
ENSSSAP00000008408
annotation not available
      
 0.457
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.