Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC106609148Probable vesicular acetylcholine transporter-B. (531 aa)    
Predicted Functional Partners:
LOC106609157
Choline O-acetyltransferase-like; Belongs to the carnitine/choline acetyltransferase family.
   
 
 0.943
LOC106589926
Choline O-acetyltransferase-like; Belongs to the carnitine/choline acetyltransferase family.
   
 
 0.943
viaat
Vesicular inhibitory amino acid transporter.
     
 0.838
LOC106566112
Vesicular inhibitory amino acid transporter.
     
 0.838
SLC32A1
Vesicular inhibitory amino acid transporter-like.
     
 0.838
LOC106571959
Vesicular inhibitory amino acid transporter-like.
     
 0.838
LOC106607756
Vesicular inhibitory amino acid transporter-like.
     
 0.838
vamp3
Vesicle-associated membrane protein 3.
   
 
 0.811
slc18a2
Synaptic vesicular amine transporter.
     
  0.776
LOC106587027
Chromaffin granule amine transporter-like.
     
  0.776
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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