STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pgam1Phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily. (254 aa)    
Predicted Functional Partners:
pgk
Phosphoglycerate kinase.
   
 0.990
LOC106587569
Glucose-6-phosphate isomerase; Belongs to the GPI family.
   
 
 0.935
LOC106568020
Phosphoglycerate kinase.
   
 0.929
glyctk
Glycerate kinase isoform X1.
     
 0.926
LOC106581777
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 0.914
PHGDH
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 0.914
LOC106565995
GDH/6PGL endoplasmic bifunctional protein-like.
  
 0.906
LOC106582765
GDH/6PGL endoplasmic bifunctional protein-like.
  
 0.906
LOC106561646
Bisphosphoglycerate mutase-like isoform X1.
  
 
 
0.905
LOC106589393
Multiple inositol polyphosphate phosphatase 1-like; Belongs to the histidine acid phosphatase family.
     
 0.901
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.