STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rundc3aRUN domain-containing protein 3A. (431 aa)    
Predicted Functional Partners:
dcakd
dephospho-CoA kinase domain-containing protein.
      
 0.593
fbxl16
F-box/LRR-repeat protein 16.
   
  
 0.579
tmem19
Transmembrane protein 19.
      
 0.562
ENSSSAP00000068890
annotation not available
      
 0.562
ap2s1
AP-2 complex subunit sigma isoform X1.
    
   0.552
AP2S1
Adaptor related protein complex 2 subunit sigma 1.
    
   0.552
ap2s1-2
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
   0.552
ENSSSAP00000006990
Transmembrane protein 145.
   
  
 0.526
LOC106577338
Transmembrane protein 145-like.
   
  
 0.526
LOC106564698
AP2-associated protein kinase 1-like isoform X2.
    
 
 0.514
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.