STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aar2C20orf4 homolog. (386 aa)    
Predicted Functional Partners:
LOC100380699
pre-mRNA-processing-splicing factor 8.
    
 
 0.987
LOC106612861
pre-mRNA-processing-splicing factor 8-like.
    
 
 0.987
LOC106600990
116 kDa U5 small nuclear ribonucleoprotein component.
    
 
 0.975
LOC106607257
116 kDa U5 small nuclear ribonucleoprotein component.
    
 
 0.975
ecd
Protein ecdysoneless homolog isoform X2.
    
 
 0.960
ENSSSAP00000052598
Ecdysoneless homolog (Drosophila).
    
 
 0.960
LOC106579886
U5 small nuclear ribonucleoprotein 200 kDa helicase-like.
    
 
 0.956
LOC106585548
U5 small nuclear ribonucleoprotein 200 kDa helicase.
    
 
 0.956
LOC106563531
Protein TSSC4-like.
    
 
 0.951
ENSSSAP00000068557
Protein TSSC4-like.
    
 
 0.951
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.