STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106603713Unconventional myosin-VIIa-like isoform X9; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2163 aa)    
Predicted Functional Partners:
cdh23
Cadherin-23.
   
 0.843
LOC106579432
Cadherin-23-like isoform X1.
   
 0.838
LOC106561052
Harmonin-like isoform X2.
   
 0.797
LOC106584586
Harmonin-like.
   
 0.797
LOC106574120
Cyclic nucleotide-gated channel cone photoreceptor subunit alpha-like isoform X1.
      
 0.777
Otof
Otoferlin.
   
  
 0.719
LOC106608042
Otoferlin-like.
   
  
 0.714
ENSSSAP00000003483
annotation not available
   
 0.672
LOC106611846
Usher syndrome type-1G protein homolog isoform X1.
   
 0.672
LOC106606395
Usher syndrome type-1G protein homolog.
   
 0.672
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.