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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106600627Transcription factor MafB-like. (333 aa)    
Predicted Functional Partners:
LOC106571028
Proto-oncogene c-Fos-like.
    
 
 0.720
LOC106608294
Proto-oncogene c-Fos-like.
    
 
 0.720
cd226
CD226 antigen precursor.
      
 0.624
LOC106572584
Transcription factor NF-E2 45 kDa subunit-like.
   
 0.612
LOC106567066
Transcription factor NF-E2 45 kDa subunit-like.
   
 0.612
LOC106575067
Nuclear factor erythroid 2-related factor 2-like isoform X1.
   
 0.594
LOC106586247
Nuclear factor erythroid 2-related factor 2-like.
   
 0.594
nf2l2
Nuclear factor erythroid 2-related factor 2.
   
 0.594
LOC106600841
Nuclear factor erythroid 2-related factor 1-like.
   
 0.563
LOC106607482
Nuclear factor erythroid 2-related factor 1-like.
   
 0.563
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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