Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CNNM1Metal transporter CNNM1. (869 aa)    
Predicted Functional Partners:
LOC106606027
Magnesium transporter.
      
 0.774
SLC41A3
Solute carrier family 41 member 3-like.
      
 0.712
ccdc183
Coiled-coil domain-containing protein 183 isoform X1.
      
 0.667
tp4a1
Protein tyrosine phosphatase type IVA 1.
    
 
 0.650
tp4a2
Tyrosine phosphatase type IVA 2.
    
 
 0.650
LOC106588828
Protein tyrosine phosphatase type IVA 2.
    
 
 0.650
ENSSSAP00000063328
Protein tyrosine phosphatase 4A1.
    
 
 0.650
spata4
Spermatogenesis-associated protein 4 isoform X1.
      
 0.627
LOC106613353
GMP synthase [glutamine-hydrolyzing]-like.
    
 0.577
LOC106581456
GMP synthase [glutamine-hydrolyzing].
    
 0.577
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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