STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hpse2Inactive heparanase-2 isoform X1. (585 aa)    
Predicted Functional Partners:
LOC106571235
Syndecan-1-like.
     
 0.901
hpse
Heparanase.
     
  0.853
ENSSSAP00000055287
Iduronate 2-sulfatase.
     
  0.853
ids
Iduronate 2-sulfatase isoform X1.
     
  0.853
LOC106568158
Heparanase-like isoform X1.
     
  0.853
LOC106582650
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
     
 0.618
LOC106565017
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
     
 0.618
ENSSSAP00000073379
Leucine-rich repeats and immunoglobulin-like domains protein 2.
      
 0.587
LOC106583004
Leucine-rich repeats and immunoglobulin-like domains protein 2 isoform X1.
      
 0.587
LOC106570634
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
     
 0.581
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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