STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106609966Cytohesin-3. (446 aa)    
Predicted Functional Partners:
arf6
ADP-ribosylation factor 6-like; Belongs to the small GTPase superfamily. Arf family.
    
 0.927
LOC106608083
ADP-ribosylation factor 6-like; Belongs to the small GTPase superfamily. Arf family.
    
 0.927
LOC106571580
ADP-ribosylation factor 6.
    
 0.927
LOC106572104
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform-like; Belongs to the PI3/PI4-kinase family.
   
  0.860
pik3cd
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.
   
  0.857
LOC106593908
Cytohesin-4-like.
   
 
  0.828
PIK3CA
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.
   
  0.802
ENSSSAP00000066775
annotation not available
   
  0.802
PIK3CA-2
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.
   
  0.802
pik3ca
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.
   
  0.802
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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