STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106600629Nuclear receptor coactivator 6-like isoform X2. (2096 aa)    
Predicted Functional Partners:
LOC106562981
set1/Ash2 histone methyltransferase complex subunit ASH2-like.
    
 0.967
bysl
Bystin-like.
   
 0.967
LOC100194676
set1/Ash2 histone methyltransferase complex subunit ASH2 isoform X2.
    
 0.967
ENSSSAP00000118277
annotation not available
   
 0.967
LOC106583489
Retinoblastoma-binding protein 5-like isoform X1.
    
 0.967
LOC106565113
Retinoblastoma-binding protein 5 isoform X1.
    
 0.967
riok2
Serine/threonine-protein kinase RIO2.
   
 0.965
tgs1
Trimethylguanosine synthase.
   
 0.962
pagr1
PAXIP1-associated glutamate-rich protein 1 isoform X2.
    
 0.957
LOC106575616
Lysine-specific demethylase 6A-like isoform X2.
   
 0.957
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.