STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106601403Phosphoribosyl pyrophosphate synthase-associated protein 1-like. (163 aa)    
Predicted Functional Partners:
prps1
Salmo salar Ribose-phosphate pyrophosphokinase 1 (prps1), mRNA.
  
 
 0.842
LOC106605051
2-oxoisovalerate dehydrogenase subunit beta, mitochondrial-like.
   
 0.805
LOC100194712
2-oxoisovalerate dehydrogenase subunit beta, mitochondrial.
   
 0.805
LOC106593429
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
   
 0.805
LOC106566255
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
   
 0.805
ENSSSAP00000053532
Ribose-phosphate pyrophosphokinase 1-like.
  
 
0.723
LOC106604323
Ribose-phosphate pyrophosphokinase 1-like.
  
 
0.719
LOC106607680
Bifunctional protein GlmU-like.
  
  
 0.718
prps2
Ribose-phosphate pyrophosphokinase 2.
  
 
0.700
LOC106612209
Ribose-phosphate pyrophosphokinase 1-like isoform X2.
  
 
0.700
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.