Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
hps1Hermansky-Pudlak syndrome 1 protein. (679 aa)    
Predicted Functional Partners:
hps4
Hermansky-Pudlak syndrome 4 protein.
    
 0.998
HPS6
Hermansky-Pudlak syndrome 6 protein.
     
 0.871
LOC106560323
4-hydroxyphenylpyruvate dioxygenase.
     
 0.782
HPD
4-hydroxyphenylpyruvate dioxygenase-like.
     
 0.782
hpd
4-hydroxyphenylpyruvate dioxygenase.
     
 0.782
LOC106585509
4-hydroxyphenylpyruvate dioxygenase.
     
 0.782
LOC106570184
Dysbindin-like isoform X1.
     
 0.724
LOC106588583
Dysbindin-like isoform X4.
     
 0.724
hps3
Hermansky-Pudlak syndrome 3 protein isoform X1.
      
 0.718
LOC106583958
Hermansky-Pudlak syndrome 3 protein-like.
      
 0.718
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.