STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000001999Lysine-rich nucleolar protein 1-like. (159 aa)    
Predicted Functional Partners:
drg1
Developmentally-regulated GTP-binding protein 1.
      
 0.589
drg1-2
Developmentally-regulated GTP-binding protein 1.
      
 0.589
LOC106613678
Tyrosine-protein kinase.
      
 0.568
LOC106573821
Tyrosine-protein kinase.
      
 0.568
LOC106601731
Immunoglobulin superfamily member 6-like.
      
 0.510
LOC106606545
IQ domain-containing protein K-like isoform X3.
      
 0.469
ENSSSAP00000021910
annotation not available
      
 0.445
ENSSSAP00000023164
annotation not available
      
 0.445
fam133b
Protein FAM133B isoform X1.
      
 0.412
LOC106588949
Protein FAM133-like isoform X1.
      
 0.412
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.