STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106601712Protein YIPF. (302 aa)    
Predicted Functional Partners:
YIPF4
Protein YIPF.
   
 
 0.782
LOC106603310
Protein YIPF.
   
 
 0.726
LOC106567783
Protein YIPF.
   
 
 0.726
yipf5
Protein YIPF.
   
 
 0.650
LOC106600306
LOW QUALITY PROTEIN: protein YIPF7-like.
   
 
 0.650
LOC106567491
Protein YIPF.
   
 
 0.650
LOC106603860
Protein YIPF.
   
 
 0.650
ENSSSAP00000011311
annotation not available
   
 
 0.648
sels
Selenoprotein S-like.
   
 
 0.648
LOC106602067
Golgi apparatus membrane protein TVP23 homolog B-like.
   
 
 0.613
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.