STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106601986Glycogen [starch] synthase, muscle-like. (621 aa)    
Predicted Functional Partners:
gbe1
1,4-alpha-glucan-branching enzyme.
  
 0.994
ENSSSAP00000040078
annotation not available
   
 0.950
LOC106579759
Glycogenin-1-like.
   
 0.950
LOC106575201
Glycogenin-1-like.
   
 0.950
glyg
Glycogenin-1.
   
 0.950
LOC106575442
Glycogenin-1-like isoform X1.
   
 0.950
pold3
DNA polymerase delta subunit 3 isoform X1.
   
 0.889
LOC106587266
Cytoplasmic tRNA 2-thiolation protein 2; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). May act by forming a heterodimer with CTU1/ATPBD3 that ligates sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position.
   
 0.889
ENSSSAP00000094257
Cytosolic thiouridylase subunit 2 homolog (S. pombe).
   
 0.889
LOC106599117
Glycogen debranching enzyme-like isoform X2.
  
 0.842
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.