STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106588830Inactive phospholipase D5-like. (523 aa)    
Predicted Functional Partners:
LOC106589682
Mitochondrial cardiolipin hydrolase-like isoform X1.
     
 0.499
LOC106590216
Mitochondrial cardiolipin hydrolase-like.
     
 0.499
LOC106574566
Phospholipase.
     
 0.469
ENSSSAP00000025511
Phospholipase D2.
     
 0.469
LOC106567877
Phospholipase.
     
 0.469
ENSSSAP00000102742
annotation not available
     
 0.469
ENSSSAP00000102885
annotation not available
     
 0.469
svopl
Putative transporter SVOPL.
      
 0.437
LOC106589835
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Functions in the biosynthesis of the anionic phospholipids phosphatidylglycerol and cardiolipin; Belongs to the CDP-alcohol phosphatidyltransferase class-II family.
     
 0.405
pgs1
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Functions in the biosynthesis of the anionic phospholipids phosphatidylglycerol and cardiolipin; Belongs to the CDP-alcohol phosphatidyltransferase class-II family.
     
 0.405
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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