STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RFXAPRegulatory factor X-associated protein-like. (218 aa)    
Predicted Functional Partners:
rfxank
DNA-binding protein RFXANK.
    
 
 0.979
LOC106588339
DNA-binding protein RFX5-like isoform X2.
    
 
 0.958
LOC106569903
DNA-binding protein RFX5-like isoform X1.
    
 
 0.958
atf1
Cyclic AMP-dependent transcription factor ATF-1.
      
 0.817
LOC106565593
Cyclic AMP-dependent transcription factor ATF-1-like isoform X4.
      
 0.817
LOC106561413
Transcription factor RFX4-like isoform X1.
    
 
 0.745
LOC106569021
Ankyrin repeat family A protein 2-like.
    
 
 0.710
ankra2
Ankyrin repeat family A protein 2.
    
 
 0.710
LOC106584737
DNA-binding protein RFX7-like.
    
 
 0.682
LOC106561777
DNA-binding protein RFX7-like.
    
 
 0.682
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.