STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106602926ADP-ribosylation factor-like protein 3. (199 aa)    
Predicted Functional Partners:
UNC119
Protein unc-119 homolog A-like.
    
 0.912
UNC119-2
Protein unc-119 homolog A-like.
    
 0.912
LOC106611341
Intersectin-2-like.
    
 0.882
ENSSSAP00000067020
Intersectin 2b.
    
 0.882
RP2
RP2 activator of ARL3 GTPase.
    
 0.826
LOC106574114
Protein XRP2; Acts as a GTPase-activating protein (GAP) for tubulin in concert with tubulin-specific chaperone C, but does not enhance tubulin heterodimerization.
    
 0.826
LOC106578912
Tubulin-specific chaperone C-like.
    
 0.826
LOC106589439
Tubulin-specific chaperone C-like.
    
 0.826
LOC106560579
Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta.
   
 0.813
pde6d
Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta isoform X1.
   
 0.813
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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