STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000002268annotation not available (117 aa)    
Predicted Functional Partners:
sec16a
Protein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus.
   
 0.979
LOC106578928
Protein transport protein Sec24C-like isoform X2.
   
 0.913
LOC106589412
Protein transport protein Sec24C-like isoform X1.
   
 0.913
SEC24A
Protein transport protein Sec24A-like isoform X1.
   
 0.895
LOC106608613
Protein transport protein Sec24D-like isoform X1.
   
 0.895
LOC106604626
Protein transport protein Sec24B-like isoform X1.
   
 0.895
tstd2
Protein transport protein Sec24B-like isoform X1.
   
 0.895
LOC106567533
Protein transport protein Sec24A-like.
   
 0.895
LOC106577619
Protein transport protein Sec24D-like.
   
 0.895
LOC106568322
Protein transport protein Sec31A-like isoform X5.
   
 0.889
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (18%) [HD]