STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106603916Proheparin-binding EGF-like growth factor. (244 aa)    
Predicted Functional Partners:
LOC106600426
Receptor protein-tyrosine kinase.
    
 0.965
LOC106590362
Receptor protein-tyrosine kinase.
    
 0.965
mmp2
72 kDa type IV collagenase precursor.
    
  0.930
LOC106562416
72 kDa type IV collagenase-like.
    
  0.930
egf
Pro-epidermal growth factor isoform X1.
     
 0.789
ereg
Proepiregulin isoform X1.
     
 0.772
LOC106585940
Epigen-like isoform X2.
     
 0.742
LOC106563612
Probetacellulin-like.
     
0.703
LOC106568258
Probetacellulin-like.
     
0.703
LOC106583550
Protransforming growth factor alpha-like isoform X1.
     
 0.674
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.