STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106603715Olfactory marker protein-like. (163 aa)    
Predicted Functional Partners:
ift88
Intraflagellar transport protein 88 homolog isoform X5.
      
 0.550
ENSSSAP00000069706
Intraflagellar transport 88 homolog.
      
 0.550
LOC106565690
Tachykinin-like peptides receptor 86C.
      
 0.527
neum
Neuromodulin.
      
 0.507
mpzl3
Myelin protein zero-like protein 3 isoform X2.
      
 0.507
pxdn
Peroxidasin homolog isoform X1.
      
 0.472
LOC106572928
Peroxidasin-like.
      
 0.472
LOC106608723
Gonadoliberin; Stimulates the secretion of gonadotropins. Belongs to the GnRH family.
      
 0.437
gnrh
GnRH-associated peptide 3; Stimulates the secretion of gonadotropins.
      
 0.437
ENSSSAP00000040392
Transmembrane O-mannosyltransferase targeting cadherins 1.
      
 0.418
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.