bafb protein (Salmo salar) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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[Homology]

Score

bafb

Barrier-to-autointegration factor B isoform X1. (97 aa)

Predicted Functional Partners:

LOC106609726

0.852

LOC106602366

0.847

vrk1

0.847

LOC106576978

0.847

lmnb2

0.834

ENSSSAP00000005161

0.799

LOC106568248

0.799

LMNA

0.793

LOC106569771

0.793

LOC106580679

0.793

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSSAP00000005161	LMNA	ENSSSAP00000005161	ENSSSAP00000019524	annotation not available	lamin-A-like; Belongs to the intermediate filament family.	0.446
ENSSSAP00000005161	LOC106569771	ENSSSAP00000005161	ENSSSAP00000036482	annotation not available	lamin-A-like; Belongs to the intermediate filament family.	0.446
ENSSSAP00000005161	LOC106576978	ENSSSAP00000005161	ENSSSAP00000110532	annotation not available	Serine/threonine-protein kinase VRK1-like isoform X1.	0.855
ENSSSAP00000005161	LOC106580679	ENSSSAP00000005161	ENSSSAP00000093884	annotation not available	lamin-A-like; Belongs to the intermediate filament family.	0.446
ENSSSAP00000005161	LOC106602366	ENSSSAP00000005161	ENSSSAP00000041761	annotation not available	Serine/threonine-protein kinase VRK1-like isoform X1.	0.855
ENSSSAP00000005161	LOC106609726	ENSSSAP00000005161	ENSSSAP00000013698	annotation not available	Inner nuclear membrane protein Man1-like.	0.559
ENSSSAP00000005161	bafb	ENSSSAP00000005161	ENSSSAP00000002355	annotation not available	Barrier-to-autointegration factor B isoform X1.	0.799
ENSSSAP00000005161	lmnb2	ENSSSAP00000005161	ENSSSAP00000043235	annotation not available	lamin-B2; Belongs to the intermediate filament family.	0.446
ENSSSAP00000005161	vrk1	ENSSSAP00000005161	ENSSSAP00000093352	annotation not available	Serine/threonine-protein kinase VRK1; Belongs to the protein kinase superfamily.	0.855
LMNA	ENSSSAP00000005161	ENSSSAP00000019524	ENSSSAP00000005161	lamin-A-like; Belongs to the intermediate filament family.	annotation not available	0.446
LMNA	LOC106568248	ENSSSAP00000019524	ENSSSAP00000056916	lamin-A-like; Belongs to the intermediate filament family.	LOW QUALITY PROTEIN: ankyrin repeat and LEM domain-containing protein 2-like.	0.446
LMNA	LOC106609726	ENSSSAP00000019524	ENSSSAP00000013698	lamin-A-like; Belongs to the intermediate filament family.	Inner nuclear membrane protein Man1-like.	0.818
LMNA	bafb	ENSSSAP00000019524	ENSSSAP00000002355	lamin-A-like; Belongs to the intermediate filament family.	Barrier-to-autointegration factor B isoform X1.	0.793
LOC106568248	LMNA	ENSSSAP00000056916	ENSSSAP00000019524	LOW QUALITY PROTEIN: ankyrin repeat and LEM domain-containing protein 2-like.	lamin-A-like; Belongs to the intermediate filament family.	0.446
LOC106568248	LOC106569771	ENSSSAP00000056916	ENSSSAP00000036482	LOW QUALITY PROTEIN: ankyrin repeat and LEM domain-containing protein 2-like.	lamin-A-like; Belongs to the intermediate filament family.	0.446
LOC106568248	LOC106576978	ENSSSAP00000056916	ENSSSAP00000110532	LOW QUALITY PROTEIN: ankyrin repeat and LEM domain-containing protein 2-like.	Serine/threonine-protein kinase VRK1-like isoform X1.	0.855
LOC106568248	LOC106580679	ENSSSAP00000056916	ENSSSAP00000093884	LOW QUALITY PROTEIN: ankyrin repeat and LEM domain-containing protein 2-like.	lamin-A-like; Belongs to the intermediate filament family.	0.446
LOC106568248	LOC106602366	ENSSSAP00000056916	ENSSSAP00000041761	LOW QUALITY PROTEIN: ankyrin repeat and LEM domain-containing protein 2-like.	Serine/threonine-protein kinase VRK1-like isoform X1.	0.855
LOC106568248	LOC106609726	ENSSSAP00000056916	ENSSSAP00000013698	LOW QUALITY PROTEIN: ankyrin repeat and LEM domain-containing protein 2-like.	Inner nuclear membrane protein Man1-like.	0.559
LOC106568248	bafb	ENSSSAP00000056916	ENSSSAP00000002355	LOW QUALITY PROTEIN: ankyrin repeat and LEM domain-containing protein 2-like.	Barrier-to-autointegration factor B isoform X1.	0.799