STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rrasRas-related protein R-Ras. (197 aa)    
Predicted Functional Partners:
LOC106580530
Serine/threonine-protein kinase A-Raf-like isoform X1.
   
 0.960
rasa2
Ras GTPase-activating protein 2.
    
 0.935
LOC106562896
Mitogen-activated protein kinase kinase kinase 1-like isoform X2.
   
 0.930
PRKCA
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
   
 
 0.917
LOC106611341
Intersectin-2-like.
    
 0.882
ENSSSAP00000067020
Intersectin 2b.
    
 0.882
LOC106613084
Neurofibromin-like isoform X5.
    
 0.862
LOC106603288
Neurofibromin-like isoform X2.
    
 0.862
pik3cd
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.
   
 0.825
LOC106581359
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform-like; Belongs to the PI3/PI4-kinase family.
   
 0.825
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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