STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106604050High affinity cationic amino acid transporter 1-like. (406 aa)    
Predicted Functional Partners:
slc3a1
Neutral and basic amino acid transport protein rBAT.
   
 0.660
4f2
4F2 cell-surface antigen heavy chain.
   
 0.602
calm2-3
4F2 cell-surface antigen heavy chain.
   
 0.602
LOC106578137
4F2 cell-surface antigen heavy chain-like isoform X3.
   
 0.602
LOC106603161
4F2 cell-surface antigen heavy chain-like.
   
 0.602
LOC106591406
Microtubule-associated tumor suppressor candidate 2-like.
      
 0.552
LOC106588049
Asc-type amino acid transporter 1-like.
  
 
 0.550
LOC106591035
Asc-type amino acid transporter 1-like.
  
 
 0.537
LOC106567382
Large neutral amino acids transporter small subunit 1-like.
  
 
 0.536
slc7a8
Large neutral amino acids transporter small subunit 2.
  
 
 0.535
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.