STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prr12Proline-rich protein 12. (2298 aa)    
Predicted Functional Partners:
scaf1
Splicing factor, arginine/serine-rich 19 isoform X1.
   
  
 0.822
LOC106583916
Splicing factor, arginine/serine-rich 19-like isoform X1.
   
  
 0.822
LOC106567509
SH3 and PX domain-containing protein 2B-like isoform X1.
      
 0.805
LOC106603845
SH3 and PX domain-containing protein 2B-like isoform X3.
      
 0.805
hmmr
Hyaluronan mediated motility receptor.
      
 0.793
LOC106604349
Hyaluronan mediated motility receptor-like isoform X2.
      
 0.793
INSC
Protein inscuteable homolog isoform X1.
   
  
 0.770
ANKRD6
Ankyrin repeat domain-containing protein 6-like isoform X5.
      
 0.583
ENSSSAP00000069491
Amyloid beta (A4) precursor protein-binding, family B, member 3.
      
 0.566
pagr1
PAXIP1-associated glutamate-rich protein 1 isoform X2.
      
 0.510
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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