STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106594444Chloride channel protein. (511 aa)    
Predicted Functional Partners:
ostm1
Osteopetrosis-associated transmembrane protein 1 isoform X1.
    
 0.948
LOC106571796
Osteopetrosis-associated transmembrane protein 1-like isoform X2.
    
 0.948
bsnd
Barttin.
   
 
 0.594
LOC106574207
Dermatopontin-like.
      
 0.568
LOC106582002
Papilin-like.
     
 0.560
slc9a8
Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.
  
  
 0.531
HCE1
Metalloendopeptidase.
      
 0.502
LOC106610392
AP-4 complex accessory subunit tepsin-like.
      
 0.468
gpaa1
Glycosylphosphatidylinositol anchor attachment 1 protein.
      
 0.468
gpr153
Probable G-protein coupled receptor 153 isoform X1.
      
 0.467
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.