STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106607666Alpha-actinin-2-like. (915 aa)    
Predicted Functional Partners:
LOC100194642
Myosin, light polypeptide 3-1.
   
 0.683
LOC100194662
Myosin light chain 1-1.
   
 0.683
LOC106565518
Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome.
   
 0.683
LOC106606220
Myozenin-1-like isoform X1.
   
 
 0.646
LOC100194528
Myozenin 1-like.
   
 
 0.646
LOC106611807
Vinculin isoform X1.
   
 
 0.640
VCL
Vinculin-like isoform X2.
   
 
 0.640
LOC106604178
Vinculin-like isoform X2.
   
 
 0.640
LOC106574738
Peripheral plasma membrane protein CASK-like.
   
  0.597
ENSSSAP00000105696
Calcium/calmodulin-dependent serine protein kinase b.
   
  0.597
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.