STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106607693Gremlin-2-like. (166 aa)    
Predicted Functional Partners:
LOC106611121
Bone morphogenetic protein 4-like.
    
 0.600
LOC106612383
Bone morphogenetic protein 2-like isoform X1.
    
 0.600
bmp4
Bone morphogenetic protein 4 precursor.
    
 0.600
bmp2
Bone morphogenetic protein 2 precursor.
    
 0.600
LOC106571739
Bone morphogenetic protein 2-like.
    
 0.600
LOC106589939
DAN domain family member 5-like.
  
   
 0.585
LOC106613058
Chordin-like.
      
 0.571
LOC106581290
Chordin; Belongs to the chordin family.
      
 0.571
LOC106604233
Growth/differentiation factor 9-like isoform X1.
    
 0.552
GDF9
Growth/differentiation factor 9-like.
    
 0.552
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.