STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106605086GTP cyclohydrolase 1-like. (237 aa)    
Predicted Functional Partners:
pts
6-pyruvoyl tetrahydrobiopterin synthase.
  
 
 0.994
gchfr
GTP cyclohydrolase 1 feedback regulatory protein.
    
 0.967
LOC106610850
GTP cyclohydrolase 1 feedback regulatory protein-like.
    
 0.951
LOC106583112
GTP cyclohydrolase 1 feedback regulatory protein.
    
 0.951
itpa
Inosine triphosphate pyrophosphatase; Pyrophosphatase that hydrolyzes the non-canonical purine nucleotides inosine triphosphate (ITP), deoxyinosine triphosphate (dITP) as well as 2'-deoxy-N-6-hydroxylaminopurine triposphate (dHAPTP) and xanthosine 5'-triphosphate (XTP) to their respective monophosphate derivatives. The enzyme does not distinguish between the deoxy- and ribose forms. Probably excludes non-canonical purines from RNA and DNA precursor pools, thus preventing their incorporation into RNA and DNA and avoiding chromosomal lesions; Belongs to the HAM1 NTPase family.
  
 
 0.946
LOC106610594
Uncharacterized protein LOC106610594.
    
 0.913
LOC100196496
Molybdenum cofactor biosynthesis protein 1 isoform X1.
    
 0.913
LOC100194664
Vps20-associated 1 like 1 isoform X1.
    
   0.891
LOC106571414
Vacuolar protein sorting-associated protein VTA1 homolog.
    
   0.891
nud15
Probable 7,8-dihydro-8-oxoguanine triphosphatase NUDT15; Belongs to the Nudix hydrolase family.
  
 
 0.873
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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