STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106605118Multiple coagulation factor deficiency protein 2 homolog isoform X1. (152 aa)    
Predicted Functional Partners:
lman1
Protein ERGIC-53 isoform X2.
   
 0.997
LOC106604360
Coagulation factor VIII-like; Belongs to the multicopper oxidase family.
     
 0.768
LOC106612066
Coagulation factor VIII-like isoform X1; Belongs to the multicopper oxidase family.
     
 0.768
LOC106581936
Coagulation factor V-like isoform X1; Belongs to the multicopper oxidase family.
     
 0.768
LOC106578928
Protein transport protein Sec24C-like isoform X2.
     
 0.731
LOC106589412
Protein transport protein Sec24C-like isoform X1.
     
 0.731
LOC106569716
Cathepsin Z-like; Belongs to the peptidase C1 family.
     
 0.704
LOC106583261
Cathepsin Z-like isoform X1; Belongs to the peptidase C1 family.
     
 0.704
LOC106608613
Protein transport protein Sec24D-like isoform X1.
     
 0.696
LOC106577619
Protein transport protein Sec24D-like.
     
 0.696
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.