STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000002575Protein FAM161A-like. (430 aa)    
Predicted Functional Partners:
syce1
Synaptonemal complex central element protein 1.
    
   0.747
LOC106574795
Interphotoreceptor matrix proteoglycan 2-like.
      
 0.705
wdr90
WD repeat-containing protein 90.
   
  
 0.635
ENSSSAP00000003966
Leucine rich repeat containing 74A.
      
 0.558
LOC106608301
Leucine-rich repeat-containing protein 74A-like isoform X3.
      
 0.558
ENSSSAP00000018406
annotation not available
      
 0.553
cmtr2
Cap-specific mRNA (Nucleoside-2'-O-)-methyltransferase 2 isoform X1.
      
 0.553
LOC106607969
Cilia- and flagella-associated protein 36-like isoform X1.
      
 0.515
cfap36
Cilia- and flagella-associated protein 36.
      
 0.515
LOC106589732
rRNA-processing protein FCF1 homolog.
      
 0.492
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.