STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000002575Protein FAM161A-like. (430 aa)    
Predicted Functional Partners:
ENSSSAP00000003966
Leucine rich repeat containing 74A.
      
 0.511
LOC106608301
Leucine-rich repeat-containing protein 74A-like isoform X3.
      
 0.511
wdr90
WD repeat-containing protein 90.
      
 0.511
ENSSSAP00000018406
annotation not available
      
 0.510
cmtr2
Cap-specific mRNA (Nucleoside-2'-O-)-methyltransferase 2 isoform X1.
      
 0.510
LOC106607969
Cilia- and flagella-associated protein 36-like isoform X1.
      
 0.508
cfap36
Cilia- and flagella-associated protein 36.
      
 0.508
LOC106589484
Protein lin-52 homolog.
      
 0.468
LOC106611063
Protein lin-52 homolog.
      
 0.468
LOC106604590
Caltractin-like.
   
    0.448
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.