STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106561256Dymeclin-like isoform X1. (665 aa)    
Predicted Functional Partners:
UNC79
Protein unc-79 homolog.
      
 0.601
LOC106611001
Protein unc-79 homolog isoform X2.
      
 0.601
hhip
Hedgehog-interacting protein.
      
 0.599
LOC106609053
Cysteine and histidine-rich domain-containing protein 1-like.
      
 0.594
LOC106585221
Potassium channel subfamily T member 1-like isoform X2.
      
 0.593
vps50
Syndetin isoform X1.
   
  
 0.575
VPS50
VPS50 subunit of EARP/GARPII complex.
   
  
 0.575
LOC106605051
2-oxoisovalerate dehydrogenase subunit beta, mitochondrial-like.
      
 0.526
LOC100194712
2-oxoisovalerate dehydrogenase subunit beta, mitochondrial.
      
 0.526
rnf17
RING finger protein 17 isoform X3.
      
 0.506
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.