STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000002638Multidrug and toxin extrusion protein 1-like. (195 aa)    
Predicted Functional Partners:
HCD2
3-hydroxyacyl-CoA dehydrogenase type-2; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.881
fdft1
Squalene synthase isoform X1.
   
 
 0.759
LOC106575027
Mitochondrial ribonuclease P protein 1-like isoform X2.
   
 0.727
ENSSSAP00000012787
tRNA methyltransferase 10C, mitochondrial RNase P subunit.
   
 0.727
TRMT10A
tRNA methyltransferase 10 homolog A-like.
   
 0.727
LOC106577597
tRNA methyltransferase 10 homolog A-like.
   
 0.727
tert
Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme.
      
 0.704
ARVCF
Armadillo repeat protein deleted in velo-cardio-facial syndrome isoform X16.
      
 0.683
ARVCF-2
Armadillo repeat protein deleted in velo-cardio-facial syndrome isoform X17.
      
 0.683
PRRC2B
Protein PRRC2B-like isoform X4.
      
 0.672
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.