STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106600642Phosphatidylinositol transfer protein beta isoform-like isoform X1. (223 aa)    
Predicted Functional Partners:
ENSSSAP00000093239
Phosphatidylinositol transfer protein, alpha a.
  
     0.530
TM188
Transmembrane protein 188.
     
 0.529
pter
Phosphotriesterase-related protein.
   
  
 0.528
ENSSSAP00000097566
Phosphotriesterase related.
   
  
 0.528
LOC106568401
Golgi phosphoprotein 3.
      
 0.520
LOC106561827
Golgi phosphoprotein 3-like.
      
 0.520
GOLPH3
Golgi phosphoprotein 3-like.
      
 0.520
LOC106572479
Tyrosine-protein phosphatase non-receptor type.
      
 0.495
LOC106567201
Tyrosine-protein phosphatase non-receptor type.
      
 0.495
LOC106609356
Endoplasmin-like.
      
 0.493
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.