STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106599786Exonuclease 3'-5' domain-containing protein 1-like isoform X2. (275 aa)    
Predicted Functional Partners:
LOC106580428
Dynein light chain.
    
 
 0.752
dyl1
Salmo salar Dynein light chain 1, cytoplasmic (dyl1), mRNA.
    
 
 0.752
LOC106581181
Dynein light chain.
    
 
 0.752
dyl2
Salmo salar Dynein light chain 2, cytoplasmic (dyl2), mRNA.
    
 
 0.752
BICD2
Protein bicaudal D homolog 2-like isoform X2.
    
 
 0.697
LOC106561378
Protein bicaudal D homolog 1-like isoform X1.
    
 
 0.697
LOC106566609
Protein bicaudal D homolog 2-like.
    
 
 0.697
ENSSSAP00000028057
annotation not available
    
 
 0.697
LOC106565154
Protein bicaudal D homolog 2-like.
    
 
 0.697
LOC106583446
Protein bicaudal D homolog 2-like isoform X1.
    
 
 0.697
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.