STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106610392AP-4 complex accessory subunit tepsin-like. (670 aa)    
Predicted Functional Partners:
ap4e1
AP-4 complex subunit epsilon-1 isoform X2.
    
 
 0.852
ENSSSAP00000079499
annotation not available
    
 
 0.818
ap4s1
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 
 0.818
ap4b1
AP-4 complex subunit beta-1.
    
 
 0.788
ap5m1
AP-5 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.
    
 
 0.613
ENSSSAP00000060553
Leucine-rich repeat-containing protein 73-like.
      
 0.601
LOC106604675
Ankyrin repeat domain-containing protein 13D-like isoform X3.
      
 0.601
lrrc73
Leucine-rich repeat-containing protein 73.
      
 0.601
ENSSSAP00000075387
Vesicle transport through interaction with t-SNAREs 1B.
      
 0.601
VSIG10
V-set and immunoglobulin domain-containing protein 10-like isoform X1.
   
  
 0.601
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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