ENSSSAP00000002886 protein (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSSSAP00000002886

annotation not available (136 aa)

Predicted Functional Partners:

use1

0.859

LOC106603635

0.840

LOC106565202

0.805

ENSSSAP00000059717

0.805

LOC106600714

0.660

LOC106592057

0.660

mapk1

0.660

mapk7

0.660

mk03

0.660

LOC106609752

0.621

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSSAP00000002886	ENSSSAP00000059717	ENSSSAP00000002886	ENSSSAP00000059717	annotation not available	Syntaxin 18.	0.805
ENSSSAP00000002886	LOC106565202	ENSSSAP00000002886	ENSSSAP00000034929	annotation not available	Syntaxin-18-like.	0.805
ENSSSAP00000002886	LOC106592057	ENSSSAP00000002886	ENSSSAP00000020723	annotation not available	Mitogen-activated protein kinase 1-like.	0.660
ENSSSAP00000002886	LOC106600714	ENSSSAP00000002886	ENSSSAP00000003675	annotation not available	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.660
ENSSSAP00000002886	LOC106603635	ENSSSAP00000002886	ENSSSAP00000014709	annotation not available	Centromere/kinetochore protein zw10 homolog isoform X3.	0.840
ENSSSAP00000002886	LOC106609752	ENSSSAP00000002886	ENSSSAP00000019048	annotation not available	RAD50-interacting protein 1-like.	0.621
ENSSSAP00000002886	mapk1	ENSSSAP00000002886	ENSSSAP00000037965	annotation not available	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.660
ENSSSAP00000002886	mapk7	ENSSSAP00000002886	ENSSSAP00000083416	annotation not available	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.660
ENSSSAP00000002886	mk03	ENSSSAP00000002886	ENSSSAP00000095471	annotation not available	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.660
ENSSSAP00000002886	use1	ENSSSAP00000002886	ENSSSAP00000041207	annotation not available	Vesicle transport protein USE1.	0.859
ENSSSAP00000059717	ENSSSAP00000002886	ENSSSAP00000059717	ENSSSAP00000002886	Syntaxin 18.	annotation not available	0.805
ENSSSAP00000059717	LOC106603635	ENSSSAP00000059717	ENSSSAP00000014709	Syntaxin 18.	Centromere/kinetochore protein zw10 homolog isoform X3.	0.997
ENSSSAP00000059717	LOC106609752	ENSSSAP00000059717	ENSSSAP00000019048	Syntaxin 18.	RAD50-interacting protein 1-like.	0.878
ENSSSAP00000059717	use1	ENSSSAP00000059717	ENSSSAP00000041207	Syntaxin 18.	Vesicle transport protein USE1.	0.995
LOC106565202	ENSSSAP00000002886	ENSSSAP00000034929	ENSSSAP00000002886	Syntaxin-18-like.	annotation not available	0.805
LOC106565202	LOC106603635	ENSSSAP00000034929	ENSSSAP00000014709	Syntaxin-18-like.	Centromere/kinetochore protein zw10 homolog isoform X3.	0.997
LOC106565202	LOC106609752	ENSSSAP00000034929	ENSSSAP00000019048	Syntaxin-18-like.	RAD50-interacting protein 1-like.	0.878
LOC106565202	use1	ENSSSAP00000034929	ENSSSAP00000041207	Syntaxin-18-like.	Vesicle transport protein USE1.	0.999
LOC106592057	ENSSSAP00000002886	ENSSSAP00000020723	ENSSSAP00000002886	Mitogen-activated protein kinase 1-like.	annotation not available	0.660
LOC106600714	ENSSSAP00000002886	ENSSSAP00000003675	ENSSSAP00000002886	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	annotation not available	0.660