STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106598919Hypoxia-inducible factor 1-alpha isoform X2. (791 aa)    
Predicted Functional Partners:
LOC106608512
Hypoxia-inducible factor 1-alpha inhibitor-like.
    
 0.892
LOC106577208
Hypoxia-inducible factor 1-alpha inhibitor.
    
 0.892
CUL2
Cullin-2 isoform X1; Belongs to the cullin family.
    
 0.890
ENSSSAP00000039657
annotation not available
    
 0.880
LOC106590672
Transcription elongation factor B polypeptide 1 isoform X2; Belongs to the SKP1 family.
    
 0.880
vhl
Von Hippel-Lindau disease tumor suppressor isoform X1.
    
 0.875
ENSSSAP00000066410
annotation not available
    
 0.875
ENSSSAP00000068366
annotation not available
    
 0.875
egln2
Egl nine homolog 2.
   
 0.858
LOC106605812
Aryl hydrocarbon receptor nuclear translocator isoform X4.
   
0.854
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.