STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106601177Cdc42 effector protein 1-like. (428 aa)    
Predicted Functional Partners:
LOC106563449
Cdc42 effector protein 2-like.
     
0.568
rhoq
Rho-related GTP-binding protein RhoQ isoform X1.
    
 0.495
rhoh
Rho-related GTP-binding protein RhoH.
    
 0.495
rhoq-2
Rho-related GTP-binding protein RhoQ.
    
 0.495
LOC106567263
Cell division control protein 42 homolog isoform X2.
    
 0.469
LOC106565619
Cell division control protein 42 homolog isoform X1.
    
 0.469
LOC106572399
Cell division control protein 42 homolog isoform X1.
    
 0.469
LOC106583122
Cell division control protein 42 homolog isoform X1.
    
 0.469
ENSSSAP00000043341
Dedicator of cytokinesis 4b.
     
 0.460
LOC106576073
Dedicator of cytokinesis protein 4-like isoform X2; Belongs to the DOCK family.
     
 0.460
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.